Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015855800.1_cds_XP_016512935.1_25526
CDS Infomation

[gene=LOC107829979] [db_xref=GeneID:107829979] [protein=histone H3.v1-like isoform X3] [protein_id=XP_016512935.1] [location=complement(join(64249..64319,64723..64870,65033..65517,65625..65748,65867..65944,66245..66362,66944..67182,67276..67296))] [gbkey=CDS]
Sequence

ATGCACGGATATGAAAGAGACGAGTTTGAGGAGTATGAAGATTTGGATGAATATGAGGAG
GAAGGTGAAGAGCAAGAAGAGGACGAGGAGGGCGAAGAGGAATATGAGGAGGAAGAGCCT
CAGCAGCCTCCACAAGAGTTGTTGGAGTACCTGGAGCTGAGACAACGACTGAAAGAAGAT
ATCAGGAAACAGAGGAAGAAGGAATTAGGTTCTGTCAATGGCCGTTCAACTGAAATTAAG
AAGGCTTTGCCGAGGGACAATTATGGTTCCTTCTTTGGACCTTCCCAGCCTGTGATCGCT
CAAAGAGTAATCCAAGAAAGCAAGTCGCTATTGGAGAATCCAAATTTGGCAGCAAAAGTC
CTGAAATCAAACCATGCTAACGATAGGAGCTCTGCATCAAAACCCGCAGTATCAAAATCT
GGTATTAGCAGCCATGCACCAAAGGTCACTAACGGGTTGAAAACAAAGGTCCAGATGTTA
AAAAATACAAGAGATTACTCATTTCTATTATCTGATGATGCTGAACTTCCTGCTCCATCA
AAAGGTTCTGTACCTCATAAAGACTCTGCCCTTTATTCTGATGCACGATTATCTTTACCA
CCAAGCAGCAAGCAATCTTTAAGCAATACGCGGAGAAAGCTGCTCAATGATCATGAAGTA
CGGAAACCTATACCAGGAAGCAGCCAAATGCAATCGAAACTGTTGACTCAGAAATCAGTT
TCTGTTAGTAAGCAATCTCAACTAGCATTAGATTTGAGGAAACAGCTTAGTAGCAGTAAA
GGGAGTGGGCCTGATCGGCCTTTGGGGCCAAAAGTGGTGCCTCCCAAAGTTATAGGCGTT
CCAAATGGCAAGAGGGTTTTGACACCAGGCGTCAAGAGCACTGTGCCTGCTTTGCATAAG
CCAACCCCTTCAAAGTTGCAACCTTCTATTCCAAGGCAGTCCTTAGTACAGAAAAAGGAA
CTGCTACAATCTGGAAAGTCAAAGGGGATATCAAATCAAGCTGGGCCTTCATCCAAATCT
AAGCGGATGATGCAGAAACAGGCAGTGCCGTCATCCAAATCTCAGATAAAGCAAATGCCT
CCTAAAACTGCAACCCGTTCTTTGGAAGATAGGCGCCCAGCAAGAAAACCAATGAGACAT
GATGAAGAAGGTGATGGAGCAGAAGCTATTAGTATGATTAGGAGGATGTTTGGGTACTTA
TCATTCCTTCCTTGTATAATCCCAACAGGTATCAAGATGATGATGATACTAGTGATATGG
AGGCTAATTTTGATGACATACTGA

Peptide Sequence

PEP ID

XP_016512935.1
PEP Infomation

PREDICTED: histone H3.v1-like isoform X3 [Nicotiana tabacum]
Sequence

MHGYERDEFEEYEDLDEYEEEGEEQEEDEEGEEEYEEEEPQQPPQELLEYLELRQRLKED
IRKQRKKELGSVNGRSTEIKKALPRDNYGSFFGPSQPVIAQRVIQESKSLLENPNLAAKV
LKSNHANDRSSASKPAVSKSGISSHAPKVTNGLKTKVQMLKNTRDYSFLLSDDAELPAPS
KGSVPHKDSALYSDARLSLPPSSKQSLSNTRRKLLNDHEVRKPIPGSSQMQSKLLTQKSV
SVSKQSQLALDLRKQLSSSKGSGPDRPLGPKVVPPKVIGVPNGKRVLTPGVKSTVPALHK
PTPSKLQPSIPRQSLVQKKELLQSGKSKGISNQAGPSSKSKRMMQKQAVPSSKSQIKQMP
PKTATRSLEDRRPARKPMRHDEEGDGAEAISMIRRMFGYLSFLPCIIPTGIKMMMILVIW
RLILMTY

Transcript Sequence

Gene sequence data has not been registered.